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Because
Science.

An integrative genomics lab, applying machine learning and data-driven approaches to elucidate disease mechanisms. 

About

About

We develop and apply genomic strategies to map molecular processes contributing to the etiology, progression, and treatment of diseases originating in the brain and/or the kidney. We investigate the impact of cell- and tissue-specific gene and transcript regulation and expression, cell-cell communication, and sex-associated molecular changes on disease manifestation.

Through machine learning and data-driven approaches, we identify optimal precision preclinical models to streamline drug targets and repositioning candidates for treating diseases.

Kidney Research • Brain Research • Drug repurposing • Methods & Tools •

Team

Our Team

Our vibrant team is dedicated to making meaningful contributions to the science community through innovative research and collaboration.

Lasseigne Lab
Lasseigne Lab
Dr. Lasseigne

BRITTANY LASSEIGNE, PHD

PRINCIPAL INVESTIGATOR | ASSOCIATE PROFESSOR

Dr. Lasseigne is an Associate Professor in the Department of Cell, Developmental and Integrative Biology with a secondary appointment in the Department of Biomedical Informatics and Data Sceince, and an Associate Scientist in the Precision Medicine Institute (PMI), the Nephrology Research & Training Center (NRTC), Comprehensive Neuroscience Center (CNC), the Center for Neurodegeneration and Experimental Therapeutics (CNET), and the Experimental Therapeutics section of the O’Neal Comprehensive Cancer Center at The University of Alabama at Birmingham (UAB) Heersink School of Medicine.

She previously completed a BS in Biological Engineering at Mississippi State University, an interdisciplinary biology, chemistry, and chemical engineering PhD in Biotechnology Science and Engineering from The University of Alabama in Huntsville (identifying biomarkers and genomic signatures of renal cell carcinoma diagnosis and progression, respectively), and a postdoctoral fellowship in genetics and genomics at the HudsonAlpha Institute for Biotechnology (determining predisposing variants and genes contributing to neurodegenerative disorders).

Brittany is passionate about developing and applying genomics technologies to human diseases and teaching genomics and data science to students and scientists of all backgrounds.

 

To that end, she also served as the PI, Director, and a student research mentor for the current NHGRI-funded R25 Summer Undergraduate and Postbacc Experiences in Research in Genomic Medicine (SUPER-GM) program, which provided research experiences for students from diverse backgrounds, especially Alabama students attending Historically Black Colleges and Universities (HBCUs).

Team

Senior Computational Biologist

T.C. Howton, PhD

Dr. Howton earned his PhD in Biology from the University of Alabama at Birmingham. During his doctoral studies, T.C. focused on using network-based approaches to elucidate the molecular interactions between plants and bacterial pathogens. T.C. currently serves as a lab manager and research scientist in the Lasseigne lab.

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Senior Computational Biologist

Lizzy Wilk

Lizzy earned her B.S. in Biology with a minor in Chemistry from the University of Alabama at Huntsville and M.S. in Biotechnology with a specialization in Bioinformatics from University of Maryland Global Campus. As a staff scientist, she focuses on rare diseases and polycystic kidney disease, leveraging machine learning (ML) and artificial intelligence (AI) to deepen mechanistic understanding of genetic disease variants and prioritize repurposed drug candidates for patients with genetic disorders

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Computational Biologist

Tabea Soelter, PhD

Dr. Soelter has a B.S. in Cell and Molecular Biology from Piedmont University and earned her Ph.D. in Cell Biology from the University of Alabama at Birmingham. During her doctoral studies, Tabea investigated the role of altered glia-neuron communication and its downstream effects on gene expression and gene regulation in Alzheimer’s disease using snRNA-seq and network approaches. As a staff scientist, Tabea is working on identifying a transcriptomic exercise signature from mouse hippocampus snRNA-seq data using machine learning approaches, investigating alternative splicing across contexts (i.e., disease and sex) in long-read RNA-seq data, and leading the creation of a harmonized public-domain polycystic kidney disease transcriptomic data hub.

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Lab Manager

Cameron McPhail

Cameron earned a B.S. in Biology with a minor in Peace, Justice and Ecology from the University of Alabama at Birmingham. After spending some time in the outdoors industry and cancer genetics, he is now working as the lab manager for the Lasseigne lab.

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Computational Scientist Assistant

Tonie Crumley

Tonie holds a bachelor's degree in Computer Science from UAB and works as a staff scientist in the Lasseigne lab.  They are currently working on PKD pathway analysis using RNA-Seq data and tools to improve reproducibility in computational science.

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Graduate Student

McKay Freeman

McKay is a graduate student in the Pathobiology, Pharmacology, and Physiology theme under the UAB Graduate Biomedical Sciences Program. She has a B.S. in Biology and a B.A. in History from the University of Alabama. Currently, she is working on drug repurposing in ADPKD and examining alternative splicing to improve therapeutic outcomes.

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Medical Student

Sasha Taluri

Sasha attends UAB Heersink School of Medicine and holds a B.S. in Genetics and Genomic Sciences from UAB. Previously in the lab, she analyzed genomic instability across different cancers. Currently, she works on various projects related to artificial intelligence-driven drug repurposing for SETBP1- and PKD-associated disorders. 

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Undergraduate Research Student

Elizabeth Okunbor

Elizabeth is a junior studying Computer Science at UAB, with a minor in Business Administration. She enjoys building full-stack applications using React, React Native, and Python/Flask, with a focus on creating tools that are both practical and user-friendly. She is especially interested in using data and technology to improve health outcomes and expand access to care through research and innovation. 

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Summer Undergraduate Student

Angela Hjelmeland

Angela is an undergraduate student at the University of Georgia pursuing a B.S. in Statistics with a minor in Spanish. Through summer research with the Lasseigne Lab, she has worked with RNA-seq and genomic datasets using computational approaches. She is currently working on target prioritization and drug repurposing.

Alumni

Amanda Clark, PhD (2022-2025)

Post-doctoral Fellow

Mualla Eraslan (2024-2025)

Lab Manager​

Emma Jones, PhD (2021-2024)

Graduate Student

Currently: Postdoctoral Fellow at Washington University

Vishal Oza, PhD (2020-2024)

Scientist II

Currently: Computational Biologist in Pathology at UAB

Jordan Whitlock, PhD (2020-2023)

Graduate Research Assistant

Currently: Board Advisor at SETBP1 Society

Jen Fisher, PhD (2020-2023)

Graduate Research Assistant

Currently: Computational Biologist at CFD Research

Rebekah Beyea (2023)

KURE Summer Student

Currently: Undergraduate Student at UAB

Nathanial Devoss (2022-2023)

​Undergraduate Research Assistant

Currently: Undergraduate Student at UAB

Anisha Haldar (2020-2023)

​Undergraduate Research Assistant

Currently: Medical Student at UABHSOM

Avery Williams (2019-2023)

​Undergraduate Research Assistant

Currently: Graduate Student at UCSD

Ryan Brownlee (2022)

KURE Summer Student​

Currently: Undergraduate Student at Mercer University

Hannah Cleary (2020-2023)

KURE Summer Student

Currently: Medical Student at University of Kentucky

 

Emily Page (2020-2021)

Grad Prep Scholar 

Currently: Graduate Student at UAB

Kasi McPherson, PhD (2020-2021)

Postdoctoral Fellow

Currently at Evolution Research Group

Drew Hardigan, MD, PhD (2020)

Postdoctoral Fellow

Currently: Neurosurgery Resident at Duke University

Roshan Darji (2019)

Computational Biology

Currently at ConstructConnect

Lasseigne Lab
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